STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_15194Short stature homeobox protein. (211 aa)    
Predicted Functional Partners:
N303_14187
LIM domain-binding protein 1.
    
 0.599
N303_02783
LIM domain-binding protein 2.
    
 0.599
N303_15451
MADS-box domain-containing protein.
    
 0.588
N303_04905
Transcription factor E2-alpha.
    
  0.547
N303_10427
T-box transcription factor TBX15.
   
 
 0.516
N303_02343
T-box transcription factor TBX18.
   
 
 0.516
N303_03796
Homeobox protein engrailed-like.
    
0.490
N303_07638
LIM/homeobox protein Lhx4.
    
0.464
N303_06209
LIM/homeobox protein Lhx3.
    
0.464
N303_06668
T-box transcription factor TBX22.
    
 
 0.454
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.