STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_06592Amiloride-sensitive sodium channel subunit gamma; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (620 aa)    
Predicted Functional Partners:
N303_06593
Amiloride-sensitive sodium channel subunit beta; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
  
0.996
N303_05214
Amiloride-sensitive sodium channel subunit alpha; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
  
0.958
N303_15809
Amiloride-sensitive sodium channel subunit alpha; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
  
0.958
N303_03368
E3 ubiquitin-protein ligase NEDD4-like.
    
 0.912
N303_08859
E3 ubiquitin-protein ligase NEDD4.
    
 0.912
N303_06400
NEDD4-like E3 ubiquitin-protein ligase WWP1.
    
  0.667
N303_04308
Stomatin-like 1.
    
 0.628
N303_02186
Polyubiquitin-C.
    
  0.604
N303_08909
E3 ubiquitin-protein ligase HECW1.
    
 0.599
N303_10054
E3 ubiquitin-protein ligase HECW2.
    
 0.599
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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