STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_07405B(0,+)-type amino acid transporter 1. (453 aa)    
Predicted Functional Partners:
N303_07571
Neutral and basic amino acid transport protein rBAT.
  
 0.891
N303_05909
Alpha-ketoglutarate-dependent dioxygenase alkB 2.
   
 0.710
N303_10633
Uncharacterized protein KIAA0513.
   
 0.710
N303_08106
Alpha-ketoglutarate-dependent dioxygenase alkB 3.
   
 0.710
N303_05243
Peroxisomal NADH pyrophosphatase NUDT12.
  
  0.697
N303_08602
DHQ_synthase domain-containing protein.
   
 0.647
N303_03372
Alpha-amylase.
   
 0.568
N303_03371
Alpha-amylase.
   
 0.568
N303_08693
Transketolase.
   
 0.535
N303_08951
Hepatocyte growth factor receptor.
    
  0.521
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.