STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_00474Histone deacetylase 11. (325 aa)    
Predicted Functional Partners:
N303_05801
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
    
 0.913
N303_15230
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
    
 0.912
N303_04012
AT-rich interactive domain-containing protein 4A.
    
 0.906
N303_13410
AT-rich interactive domain-containing protein 4B.
    
 0.906
N303_00978
Histone H2A; Belongs to the histone H2A family.
   
 0.855
N303_01410
Histone H2A; Belongs to the histone H2A family.
   
 0.855
N303_12428
Nuclear receptor corepressor 1.
    
 0.840
N303_01790
Breast cancer metastasis-suppressor 1-like.
    
 0.814
N303_07946
Transcriptional adapter 1.
    
 0.809
N303_15052
Paired amphipathic helix protein Sin3b.
    
 0.776
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.