STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_01902Protein fem-1 B. (583 aa)    
Predicted Functional Partners:
N303_11065
UBX domain-containing protein 7.
    
 0.978
N303_10920
Folliculin-interacting protein 1.
    
 
 0.903
N303_14744
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.790
N303_02847
RING-box protein 1.
    
 0.782
N303_09119
Transcription elongation factor B polypeptide 2.
    
 0.739
N303_07306
COMM domain-containing protein 8.
   
  0.682
N303_14722
COP9 signalosome complex subunit 5.
    
 0.671
N303_03946
Leucine-rich repeat protein 1.
    
 0.650
N303_00806
COP9 signalosome complex subunit 3.
    
  0.643
N303_02434
RING-box protein 2.
    
 0.641
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.