STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_10796Axin-1. (841 aa)    
Predicted Functional Partners:
N303_06935
Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.
   
 0.996
N303_08338
Adenomatous polyposis coli protein.
    
 0.993
N303_02203
Catenin beta-1.
   
 0.993
N303_10279
Segment polarity protein dishevelled DVL-3.
   
 0.972
N303_05220
Segment polarity protein dishevelled DVL-1.
   
 0.972
N303_00909
Poly [ADP-ribose] polymerase.
    
 0.971
N303_11509
Casein kinase I isoform alpha; Belongs to the protein kinase superfamily.
    
 0.971
N303_09178
Poly [ADP-ribose] polymerase.
    
 0.945
N303_01855
Lymphoid enhancer-binding factor 1.
   
 0.944
N303_10925
Lymphoid enhancer-binding factor 1.
   
 0.919
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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