STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_07426Cullin-4A; Belongs to the cullin family. (725 aa)    
Predicted Functional Partners:
N303_05655
DNA damage-binding protein 1.
  
 0.998
N303_07606
Denticleless protein.
    
 0.993
N303_15598
Protein VPRBP.
   
 0.993
N303_02847
RING-box protein 1.
    
 0.987
N303_09517
Cullin-associated NEDD8-dissociated protein 1.
   
 0.982
N303_02511
DNA excision repair protein ERCC-8.
    
 0.977
N303_08163
DNA damage-binding protein 2.
    
 0.969
N303_14722
COP9 signalosome complex subunit 5.
    
 0.962
N303_00642
COP9 signalosome complex subunit 4.
    
 0.958
N303_02434
RING-box protein 2.
    
 0.956
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.