STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_10854Vacuolar protein sorting-associated protein 26B. (336 aa)    
Predicted Functional Partners:
N303_12622
Vacuolar protein sorting-associated protein 35.
   
 0.987
N303_14420
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 0.980
N303_10461
Vacuolar protein sorting-associated protein 26A.
  
 
0.956
N303_15123
Sorting nexin-12.
   
 0.912
N303_13511
Sorting nexin-3.
   
 0.912
N303_04083
TBC1 domain family member 5.
   
 
 0.874
N303_13436
Sorting nexin-27.
   
 
 0.850
N303_08995
Sorting nexin-11.
    
 0.846
N303_13142
Sorting nexin-10.
    
 0.846
N303_05756
Sorting nexin-1.
   
 
 0.845
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.