STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_06716Cysteine-rich PDZ-binding protein. (81 aa)    
Predicted Functional Partners:
N303_15704
Armadillo repeat-containing protein 7.
    
 
 0.877
N303_02838
PHD finger-like domain-containing protein 5A.
   
   0.833
N303_00543
RING finger protein 113A.
    
   0.829
N303_12126
Pre-mRNA-processing-splicing factor 8.
    
   0.829
N303_10049
Splicing factor 3B subunit 1.
    
   0.829
N303_05074
Splicing factor 3B subunit 3.
    
   0.829
N303_01980
Protein CWC15 A.
   
   0.659
N303_03484
Pre-mRNA branch site protein p14.
   
   0.654
N303_13980
RNA-binding protein 48.
   
 
 0.652
N303_04488
Small nuclear ribonucleoprotein F.
   
   0.638
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.