STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_11004Putative ATP-dependent RNA helicase DHX36. (910 aa)    
Predicted Functional Partners:
N303_03487
Intersectin-2.
    
  0.990
N303_10280
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
 0.870
N303_13712
Intersectin-1.
    
  0.848
N303_14035
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
 
  
  0.839
N303_03760
Myeloid differentiation primary response protein MyD88.
   
 0.815
N303_01638
AP-2 complex subunit sigma.
    
 0.805
N303_06498
U3 small nucleolar RNA-associated protein 14 A.
   
 0.789
N303_15667
U3 small nucleolar RNA-associated protein 18.
   
 0.775
N303_09324
AP complex subunit beta.
    
 0.769
N303_11080
AP-4 complex subunit beta-1.
    
 0.769
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.