STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_01375Vacuolar protein sorting-associated protein 13C. (3719 aa)    
Predicted Functional Partners:
N303_12622
Vacuolar protein sorting-associated protein 35.
   
 
 0.716
N303_09441
Putative tyrosine-protein phosphatase auxilin.
    
 
 0.672
N303_13728
Synaptojanin-1.
    
 
 0.658
N303_15522
Autophagy-related protein 2 B.
   
  
 0.588
N303_05911
Acetyl-CoA carboxylase 2.
   
  
 0.558
N303_08204
Vam6/Vps39-like.
   
 
 0.547
N303_01396
Neuronal acetylcholine receptor subunit alpha-5.
   
  
 0.544
N303_15386
DnaJ subfamily C member 13.
   
  
 0.537
N303_09904
85/88 kDa calcium-independent phospholipase A2.
   
  
 0.520
N303_00123
Protein RIC-3.
      
 0.503
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.