STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_11083Synaptotagmin-6. (441 aa)    
Predicted Functional Partners:
N303_03487
Intersectin-2.
     
 0.688
N303_08048
Stonin-2.
    
 0.602
N303_13712
Intersectin-1.
     
 0.571
N303_11487
Peripheral plasma membrane protein CASK.
     
 0.564
N303_12272
Stonin-1.
    
 0.557
N303_09751
Synaptosomal-associated protein 47.
    
 0.514
N303_07445
SH3 domain-containing RING finger protein 3.
    
  0.503
N303_01216
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 0.500
N303_02507
Ras-related protein Rab-3C.
   
 0.495
N303_03848
Ras-related protein Rab-3B.
   
 0.495
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.