STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_15513Cyclin-K; Belongs to the cyclin family. (585 aa)    
Predicted Functional Partners:
N303_13368
Cyclin-dependent kinase 12.
    
 0.971
N303_08919
Cyclin-dependent kinase 13.
    
 0.971
N303_06079
Cyclin-dependent kinase 9.
   
 0.967
N303_10003
Transcription elongation factor SPT5.
    
 0.916
N303_04471
CCR4-NOT transcription complex subunit 2.
   
   0.895
N303_13049
Transcription elongation factor SPT4.
    
 0.895
N303_09748
LIM/homeobox protein Lhx5.
    
   0.881
N303_14589
LIM/homeobox protein Lhx1.
    
   0.881
N303_10486
Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily.
     
 0.872
N303_04822
Cyclin-H; Belongs to the cyclin family.
     
 0.869
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.