STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_09460DEP domain-containing protein 1A. (789 aa)    
Predicted Functional Partners:
N303_13237
Lecithin retinol acyltransferase.
     
 0.832
N303_15223
Patatin-like phospholipase domain-containing protein 4.
     
 0.790
N303_14741
Retinol dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.789
N303_07200
Retinol dehydrogenase 7.
   
 
 0.787
N303_08439
G2/mitotic-specific cyclin-B2; Belongs to the cyclin family.
   
    0.687
N303_15056
Unconventional myosin-IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.593
N303_01915
Unconventional myosin-IXa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.593
N303_06627
Actin-binding protein anillin.
   
 
 0.583
N303_10456
Delta-1-pyrroline-5-carboxylate synthase.
      
 0.539
N303_10926
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
  0.536
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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