STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_09465Cystathionine gamma-lyase. (342 aa)    
Predicted Functional Partners:
N303_02593
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.994
N303_14971
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 0.983
N303_14968
Cystathionine beta-synthase.
  
 0.970
N303_14970
Cystathionine beta-synthase.
  
 0.967
N303_14969
Cystathionine beta-synthase.
 
 0.965
N303_13423
Methionine synthase.
  
 
 0.944
N303_10477
Betaine--homocysteine S-methyltransferase 1.
  
 
 0.944
N303_14020
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 0.942
N303_01297
Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.937
N303_05328
Bifunctional glutamate/proline--tRNA ligase.
    
 0.936
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.