STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_06173RNA exonuclease 4. (399 aa)    
Predicted Functional Partners:
N303_02110
PAB-dependent poly(A)-specific ribonuclease subunit 3.
    
 0.898
N303_04897
WD repeat-containing protein 18.
   
  0.884
N303_08728
RNA helicase.
  
 0.878
N303_13161
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.874
N303_15471
tRNA (Adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A.
   
   0.829
N303_11007
p2Y purinoceptor 1; Belongs to the G-protein coupled receptor 1 family.
   
   0.825
N303_12969
Exonuclease domain-containing protein.
  
 0.823
N303_13409
RNA-binding protein 34.
   
 0.816
N303_13298
Deoxynucleotidyltransferase terminal-interacting protein 2.
   
    0.810
N303_00245
rRNA-processing protein UTP23.
   
   0.798
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.