Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
N303_00567 | N303_03439 | A0A091GD58 | A0A091FJ47 | Beclin-1. | Apoptosis regulator Bcl-2. | 0.993 |
N303_00567 | N303_08835 | A0A091GD58 | A0A091G4B2 | Beclin-1. | Bcl-2-related protein A1. | 0.870 |
N303_00567 | N303_11110 | A0A091GD58 | A0A091GN00 | Beclin-1. | Bcl-2 homologous antagonist/killer. | 0.870 |
N303_00567 | N303_11529 | A0A091GD58 | A0A091FYV3 | Beclin-1. | Induced myeloid leukemia cell differentiation protein Mcl-1. | 0.941 |
N303_00567 | N303_12204 | A0A091GD58 | A0A091G6P6 | Beclin-1. | Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.543 |
N303_03439 | N303_00567 | A0A091FJ47 | A0A091GD58 | Apoptosis regulator Bcl-2. | Beclin-1. | 0.993 |
N303_03439 | N303_04501 | A0A091FJ47 | A0A091FT13 | Apoptosis regulator Bcl-2. | Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP. | 0.862 |
N303_03439 | N303_06496 | A0A091FJ47 | A0A091G3S3 | Apoptosis regulator Bcl-2. | Uncharacterized protein. | 0.639 |
N303_03439 | N303_11110 | A0A091FJ47 | A0A091GN00 | Apoptosis regulator Bcl-2. | Bcl-2 homologous antagonist/killer. | 0.969 |
N303_03439 | N303_11529 | A0A091FJ47 | A0A091FYV3 | Apoptosis regulator Bcl-2. | Induced myeloid leukemia cell differentiation protein Mcl-1. | 0.578 |
N303_03439 | N303_12204 | A0A091FJ47 | A0A091G6P6 | Apoptosis regulator Bcl-2. | Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.940 |
N303_03439 | N303_13255 | A0A091FJ47 | A0A091FUS3 | Apoptosis regulator Bcl-2. | BH3-interacting domain death agonist. | 0.974 |
N303_04501 | N303_03439 | A0A091FT13 | A0A091FJ47 | Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP. | Apoptosis regulator Bcl-2. | 0.862 |
N303_04501 | N303_06496 | A0A091FT13 | A0A091G3S3 | Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP. | Uncharacterized protein. | 0.456 |
N303_04501 | N303_08835 | A0A091FT13 | A0A091G4B2 | Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP. | Bcl-2-related protein A1. | 0.785 |
N303_04501 | N303_11110 | A0A091FT13 | A0A091GN00 | Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP. | Bcl-2 homologous antagonist/killer. | 0.785 |
N303_04501 | N303_11529 | A0A091FT13 | A0A091FYV3 | Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP. | Induced myeloid leukemia cell differentiation protein Mcl-1. | 0.785 |
N303_04501 | N303_12204 | A0A091FT13 | A0A091G6P6 | Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP. | Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.999 |
N303_06496 | N303_03439 | A0A091G3S3 | A0A091FJ47 | Uncharacterized protein. | Apoptosis regulator Bcl-2. | 0.639 |
N303_06496 | N303_04501 | A0A091G3S3 | A0A091FT13 | Uncharacterized protein. | Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP. | 0.456 |
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