STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_14381Phosphatidylinositol phosphatase PTPRQ. (2331 aa)    
Predicted Functional Partners:
N303_15450
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.659
N303_01005
Leucine-rich repeat and guanylate kinase domain-containing protein.
    
 0.610
N303_09412
Histone H2A deubiquitinase MYSM1.
    
 0.600
N303_04473
Receptor-type tyrosine-protein phosphatase R.
    
 
0.597
N303_09213
Tyrosine-protein phosphatase non-receptor type 20.
    
 
0.597
N303_06450
Tyrosine-protein phosphatase non-receptor type 7.
    
 
0.597
N303_04012
AT-rich interactive domain-containing protein 4A.
    
 0.574
N303_13410
AT-rich interactive domain-containing protein 4B.
    
 0.574
N303_14383
Otogelin-like.
 
 
 0.570
N303_00677
Growth arrest-specific protein 7.
   
 0.563
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.