STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_04710N-acetyltransferase ESCO1. (848 aa)    
Predicted Functional Partners:
N303_11354
Structural maintenance of chromosomes protein 3.
   
 0.977
N303_08390
Sister chromatid cohesion protein PDS5 A.
    
 0.941
N303_11813
Structural maintenance of chromosomes protein 1B.
   
 0.889
N303_12013
Structural maintenance of chromosomes protein 4.
   
 0.874
N303_10540
Structural maintenance of chromosomes protein 5.
   
 0.858
N303_00246
Double-strand-break repair protein rad21.
   
 0.853
N303_11969
Double-strand-break repair protein rad21-like 1.
   
 0.853
N303_10333
Structural maintenance of chromosomes protein 6.
   
 0.841
N303_13161
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.827
N303_07861
Wings apart-like.
   
 
 0.806
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.