STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_09090Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family. (462 aa)    
Predicted Functional Partners:
N303_12620
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.997
N303_13101
Uncharacterized protein.
  
0.997
N303_06358
Cytochrome b-c1 complex subunit 7.
   
 0.995
N303_04288
Uncharacterized protein.
   
 0.993
N303_01412
Uncharacterized protein.
   
 0.992
N303_06049
Epimerase domain-containing protein.
  
 0.992
N303_10637
Uncharacterized protein.
   
 0.992
N303_10916
Cytochrome b-c1 complex subunit 8.
   
 0.988
N303_09317
Cytochrome b-c1 complex subunit 9.
   
 0.988
N303_08473
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
  
 0.986
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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