STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_02654PR domain zinc finger protein 13. (145 aa)    
Predicted Functional Partners:
N303_13499
Adenylate kinase 9.
    
  0.843
N303_13498
Adenylate kinase 9.
    
  0.843
N303_13716
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
   
 
  0.636
N303_04606
BRCA1-associated RING domain protein 1.
    
 0.551
N303_08707
Ragulator complex protein LAMTOR2.
    
  0.504
N303_00137
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
  0.500
N303_10979
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
    
  0.499
N303_13500
Adenylate kinase 9.
    
  0.497
N303_14764
Uncharacterized protein.
    
  0.491
N303_07465
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
    
  0.491
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.