STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_13107LYR motif-containing protein 1; Belongs to the complex I LYR family. (122 aa)    
Predicted Functional Partners:
N303_12063
Elongation factor 2.
    
 0.815
N303_05125
B9 domain-containing protein 1.
    
 0.772
N303_09960
Coiled-coil and C2 domain-containing protein 2A.
    
 0.762
N303_08248
DNA/RNA-binding protein KIN17.
    
 0.729
N303_11689
Elongation factor Tu GTP-binding domain-containing protein 1.
    
 0.690
N303_12838
116 kDa U5 small nuclear ribonucleoprotein component.
    
 0.690
N303_13029
Meckel syndrome type 1 protein.
    
 0.676
N303_06376
Meckelin.
     
 0.672
N303_08041
Galactocerebrosidase.
    
  0.614
N303_05659
Transmembrane protein 216.
     
 0.604
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.