STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_06004MAP7 domain-containing protein 1. (645 aa)    
Predicted Functional Partners:
N303_04897
WD repeat-containing protein 18.
   
 0.629
N303_15450
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
  0.603
N303_15640
Rhomboid-related protein 3; Belongs to the peptidase S54 family.
    
 0.595
N303_04993
Testis-expressed sequence 10 protein.
    
 0.594
N303_09303
Pescadillo.
   
 0.553
N303_06348
60S ribosomal protein L30.
    
  0.521
N303_03219
HLA class II histocompatibility antigen gamma chain.
   
 0.515
N303_03220
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.515
N303_08220
Histone-lysine N-methyltransferase SUV39H2.
    
 0.514
N303_01744
Histone-lysine N-methyltransferase SUV39H1.
    
 0.514
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.