STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_04317Meiotic recombination protein REC114-like. (234 aa)    
Predicted Functional Partners:
N303_05076
L-fucose kinase.
  
 
 0.980
N303_06871
Transcription termination factor 2.
  
 
 0.979
N303_03418
GDP-mannose 4,6 dehydratase.
    
 0.932
N303_00949
Putative ankyrin repeat domain-containing protein 31.
   
 
 0.925
N303_12073
DNA ligase.
   
 0.915
N303_02386
DNA ligase.
   
 0.891
N303_08693
Transketolase.
    
 0.890
N303_01613
Inositol-1-monophosphatase.
   
 
 0.888
N303_07390
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.856
N303_05455
DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.
    
 0.849
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.