Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Lreu_0828 | Lreu_0829 | Hypothetical protein. | PFAM: phosphoadenosine phosphosulfate reductase. | 0.542 |
Lreu_0828 | Lreu_0830 | Hypothetical protein. | Hypothetical protein. | 0.542 |
Lreu_0828 | Lreu_0831 | Hypothetical protein. | SMART: ParB domain protein nuclease. | 0.522 |
Lreu_0828 | Lreu_0832 | Hypothetical protein. | Hypothetical protein. | 0.494 |
Lreu_0828 | Lreu_0833 | Hypothetical protein. | TIGRFAM: phage terminase, large subunit, PBSX family; PFAM: phage terminase large subunit; protein of unknown function DUF1545. | 0.494 |
Lreu_0828 | Lreu_0834 | Hypothetical protein. | TIGRFAM: phage portal protein, SPP1 family; PFAM: phage portal protein, SPP1. | 0.494 |
Lreu_0828 | Lreu_0835 | Hypothetical protein. | TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family. | 0.494 |
Lreu_0828 | Lreu_0836 | Hypothetical protein. | Hypothetical protein. | 0.484 |
Lreu_0829 | Lreu_0828 | PFAM: phosphoadenosine phosphosulfate reductase. | Hypothetical protein. | 0.542 |
Lreu_0829 | Lreu_0830 | PFAM: phosphoadenosine phosphosulfate reductase. | Hypothetical protein. | 0.773 |
Lreu_0829 | Lreu_0831 | PFAM: phosphoadenosine phosphosulfate reductase. | SMART: ParB domain protein nuclease. | 0.755 |
Lreu_0829 | Lreu_0832 | PFAM: phosphoadenosine phosphosulfate reductase. | Hypothetical protein. | 0.698 |
Lreu_0829 | Lreu_0833 | PFAM: phosphoadenosine phosphosulfate reductase. | TIGRFAM: phage terminase, large subunit, PBSX family; PFAM: phage terminase large subunit; protein of unknown function DUF1545. | 0.735 |
Lreu_0829 | Lreu_0834 | PFAM: phosphoadenosine phosphosulfate reductase. | TIGRFAM: phage portal protein, SPP1 family; PFAM: phage portal protein, SPP1. | 0.705 |
Lreu_0829 | Lreu_0835 | PFAM: phosphoadenosine phosphosulfate reductase. | TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family. | 0.698 |
Lreu_0829 | Lreu_0836 | PFAM: phosphoadenosine phosphosulfate reductase. | Hypothetical protein. | 0.683 |
Lreu_0829 | Lreu_0837 | PFAM: phosphoadenosine phosphosulfate reductase. | Hypothetical protein. | 0.442 |
Lreu_0829 | Lreu_0838 | PFAM: phosphoadenosine phosphosulfate reductase. | Hypothetical protein. | 0.424 |
Lreu_0830 | Lreu_0828 | Hypothetical protein. | Hypothetical protein. | 0.542 |
Lreu_0830 | Lreu_0829 | Hypothetical protein. | PFAM: phosphoadenosine phosphosulfate reductase. | 0.773 |
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