STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lreu_0861PFAM: carbohydrate kinase, FGGY; Belongs to the FGGY kinase family. (509 aa)    
Predicted Functional Partners:
Lreu_1766
6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
    
 0.913
Lreu_0578
6-phosphogluconolactonase.
    
 0.903
Lreu_0793
PFAM: carbohydrate kinase, FGGY; Belongs to the FGGY kinase family.
  
  
 
0.901
Lreu_0860
Hypothetical protein.
  
  
 0.835
Lreu_0795
TIGRFAM: gluconate transporter; PFAM: Gluconate transporter.
 
  
 0.576
Lreu_0862
PFAM: GCN5-related N-acetyltransferase.
       0.473
Lreu_1167
PFAM: ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 
 0.426
Lreu_0481
L-ribulose 5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein.
 
  
 0.404
Your Current Organism:
Lactobacillus reuteri
NCBI taxonomy Id: 557436
Other names: L. reuteri DSM 20016, Lactobacillus reuteri DSM 20016, Lactobacillus reuteri str. DSM 20016, Lactobacillus reuteri strain DSM 20016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.