STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lreu_1649TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein. (887 aa)    
Predicted Functional Partners:
Lreu_1067
Transporter, CPA2 family; PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; TC 2.A.37.
  
 
 0.684
Lreu_1926
PFAM: MgtC/SapB transporter.
  
 
 0.657
Lreu_0391
Chloride channel, core; PFAM: TrkA-C domain protein; Chloride channel, core.
  
 
 0.551
Lreu_1648
Prolinase, Serine peptidase, MEROPS family S33; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family.
   
 
 0.524
Lreu_1644
Ornithine carbamoyltransferase; PFAM: binding-protein-dependent transport systems inner membrane component.
     
 0.501
Lreu_1650
PFAM: Ferritin, Dps family protein; Belongs to the Dps family.
       0.486
Lreu_0321
PFAM: iron-containing alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.482
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
 
  
 0.440
Lreu_1766
6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
 
 
 
 0.434
Lreu_1665
Sodium/proton antiporter, CPA1 family; PFAM: sodium/hydrogen exchanger; TC 2.A.36.
   
 
 0.433
Your Current Organism:
Lactobacillus reuteri
NCBI taxonomy Id: 557436
Other names: L. reuteri DSM 20016, Lactobacillus reuteri DSM 20016, Lactobacillus reuteri str. DSM 20016, Lactobacillus reuteri strain DSM 20016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.