Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KZX17484.1Putative peptidoglycan binding domain protein. (247 aa)    
Predicted Functional Partners:
KZX17483.1
Hypothetical protein.
       0.539
KZX17481.1
Hypothetical protein.
       0.535
KZX17482.1
H-type lectin domain protein.
       0.535
KZX17479.1
Baseplate J-like protein.
 
     0.534
KZX17480.1
Hypothetical protein.
       0.506
KZX17477.1
Hypothetical protein.
       0.462
KZX17478.1
Hypothetical protein.
       0.462
KZX17476.1
Transglutaminase-like superfamily protein.
       0.438
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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