rps17e protein (Methanobrevibacter filiformis)

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Score

rps17e

30S ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family. (65 aa)

Predicted Functional Partners:

rpsG

0.999

rps19e

0.999

rpsI

0.999

rplM

0.999

rps6e

0.999

rpsO

0.998

rpsJ

0.998

rpl40e

0.998

rpsB

0.998

rpsM

0.998

Your Current Organism:

Methanobrevibacter filiformis

NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rpl40e	rplM	MBFIL_05930	MBFIL_14030	50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rpl40e	rps17e	MBFIL_05930	MBFIL_01670	50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	30S ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.	0.998
rpl40e	rps19e	MBFIL_05930	MBFIL_05530	50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.998
rpl40e	rps6e	MBFIL_05930	MBFIL_16760	50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.998
rpl40e	rpsB	MBFIL_05930	MBFIL_11090	50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.998
rpl40e	rpsG	MBFIL_05930	MBFIL_04810	50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family.	0.995
rpl40e	rpsI	MBFIL_05930	MBFIL_14020	50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rpl40e	rpsJ	MBFIL_05930	MBFIL_04780	50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.996
rpl40e	rpsM	MBFIL_05930	MBFIL_14080	50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family.	0.996
rpl40e	rpsO	MBFIL_05930	MBFIL_02980	50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	30S ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.	0.995
rplM	rpl40e	MBFIL_14030	MBFIL_05930	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	0.999
rplM	rps17e	MBFIL_14030	MBFIL_01670	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.	0.999
rplM	rps19e	MBFIL_14030	MBFIL_05530	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.999
rplM	rps6e	MBFIL_14030	MBFIL_16760	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
rplM	rpsB	MBFIL_14030	MBFIL_11090	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.999
rplM	rpsG	MBFIL_14030	MBFIL_04810	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family.	0.999
rplM	rpsI	MBFIL_14030	MBFIL_14020	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsJ	MBFIL_14030	MBFIL_04780	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.999
rplM	rpsM	MBFIL_14030	MBFIL_14080	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family.	0.999
rplM	rpsO	MBFIL_14030	MBFIL_02980	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.	0.999