STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fdnGFormate dehydrogenase, nitrate-inducible, major subunit precursor. (470 aa)    
Predicted Functional Partners:
fhcC
Formyltransferase/hydrolase complex Fhc subunit C.
 
 0.999
fhcA
Formyltransferase/hydrolase complex Fhc subunit A.
 
 0.999
KZX17433.1
Molybdopterin dinucleotide binding domain protein.
 
 
 0.999
ndhI_1
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic.
 
 
  0.999
fhcD_2
Formyltransferase/hydrolase complex subunit D; Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) and methanofuran (MFR); Belongs to the FTR family.
 
 
 0.998
nuoI
NADH-quinone oxidoreductase subunit I.
 
 0.997
fhcD_1
Formyltransferase/hydrolase complex subunit D.
 
 
 0.995
KZX17436.1
Ferredoxin-2.
  
 
  0.987
KZX17422.1
Coenzyme F420-reducing hydrogenase subunit beta.
 
 0.983
fdhF
Formate dehydrogenase H.
 
 
0.969
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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