STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KZX17334.1Hypothetical protein. (187 aa)    
Predicted Functional Partners:
KZX12570.1
Hypothetical protein; Belongs to the MEMO1 family.
    0.992
tldD_1
Metalloprotease TldD.
       0.937
obgE
GTPase ObgE/CgtA.
       0.840
KZX17336.1
Hsp20/alpha crystallin family protein; Belongs to the small heat shock protein (HSP20) family.
  
    0.773
lhyD
L-hydantoinase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
       0.671
nfo_3
Putative endonuclease 4.
       0.671
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
       0.653
KZX10710.1
Fibronectin-binding protein A N-terminus (FbpA).
       0.493
KZX10711.1
Hypothetical protein.
       0.478
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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