STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KZX17345.1Bacterial membrane flanked domain protein. (352 aa)    
Predicted Functional Partners:
KZX10640.1
DNA-binding transcriptional regulator IlvY.
  
  
 0.478
KZX15362.1
Zc3h12a-like ribonuclease NYN domain protein.
  
     0.470
KZX15402.1
Pseudomurein-binding repeat protein.
 
     0.464
KZX11175.1
Replication factor A.
  
     0.445
KZX10623.1
Oligosaccharyl transferase STT3 subunit.
  
     0.421
KZX12026.1
Hypothetical protein.
  
     0.412
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.