STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
murC_1UDP-N-acetylmuramate--L-alanine ligase. (503 aa)    
Predicted Functional Partners:
nifD_1
Nitrogenase molybdenum-iron protein alpha chain.
 
  
 0.993
nifH1_1
Nitrogenase iron protein 1; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
    
 0.942
murC_2
UDP-N-acetylmuramate--L-alanine ligase.
 
 
 0.905
nadK
NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
 
    0.901
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase.
 
 0.876
tagO
Putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase.
 
 0.865
pdaD
Pyruvoyl-dependent arginine decarboxylase.
 
     0.796
KZX12170.1
Hypothetical protein.
 
   
 0.781
KZX10087.1
Hypothetical protein; Belongs to the UPF0288 family.
  
   
 0.781
KZX10091.1
Hypothetical protein.
  
     0.738
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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