STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gpsAGlycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (321 aa)    
Predicted Functional Partners:
egsA
Glycerol-1-phosphate dehydrogenase; Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea.
    
 0.949
gap
Glyceraldehyde-3-phosphate dehydrogenase.
  
 
 0.665
KZX15725.1
Acetyltransferase (GNAT) family protein.
    
   0.597
trxB
Thioredoxin reductase.
 
  
  0.565
KZX17306.1
F420H2 dehydrogenase subunit F.
  
    0.553
lcfB_2
long-chain-fatty-acid--CoA ligase.
 
 
 0.551
lcfB_1
long-chain-fatty-acid--CoA ligase.
 
 
 0.541
hldE_1
Bifunctional protein HldE; Catalyzes the transfer of the AMP portion of ATP to flavin mononucleotide (FMN) to produce flavin adenine dinucleotide (FAD) coenzyme.
    
 0.512
cpdA_1
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA.
    
 0.504
spsI
Bifunctional IPC transferase and DIPP synthase.
 
     0.494
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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