STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KZX17183.1Hypothetical protein. (167 aa)    
Predicted Functional Partners:
KZX11416.1
PUA domain protein.
 
     0.641
KZX10447.1
Hypothetical protein; Belongs to the UPF0179 family.
  
   
 0.625
KZX09991.1
Hypothetical protein.
  
     0.597
KZX14916.1
Mov34/MPN/PAD-1 family protein.
  
     0.542
recJ
single-stranded-DNA-specific exonuclease RecJ.
  
     0.532
KZX13497.1
Kinase binding protein CGI-121.
  
     0.519
KZX11988.1
Cell division control protein 6; Involved in regulation of DNA replication.
  
     0.498
hisB
Histidine biosynthesis bifunctional protein HisB.
       0.493
tiaS
OB-fold nucleic acid binding domain protein; ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA.
  
     0.490
KZX11403.1
PAC2 family protein.
  
     0.468
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.