Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KZX17165.1NAD(P)H dehydrogenase. (154 aa)    
Predicted Functional Partners:
KZX17166.1
Hypothetical protein; NfeD-like C-terminal, partner-binding.
       0.615
fdhF
Formate dehydrogenase H.
  
  
  0.500
cysK1
O-acetylserine sulfhydrylase.
  
  
  0.495
hflK
Modulator of FtsH protease HflK.
       0.495
KZX17164.1
Hypothetical protein.
       0.453
metC
Cystathionine beta-lyase.
     
 0.429
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
    
  0.424
mer
Phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase; Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT; Belongs to the mer family.
     
  0.418
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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