cmoA protein (Methanobrevibacter filiformis)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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[Homology]

Score

cmoA

tRNA (cmo5U34)-methyltransferase. (227 aa)

Predicted Functional Partners:

rpsE

0.892

KZX10001.1

0.702

yrrB

0.693

rps19e

0.689

rps6e

0.680

rps3ae

0.679

rpsO

0.675

rpl7ae

0.663

cshA

0.652

flpA

0.652

Your Current Organism:

Methanobrevibacter filiformis

NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KZX10001.1	cmoA	MBFIL_19350	MBFIL_03310	Tetratricopeptide repeat protein.	tRNA (cmo5U34)-methyltransferase.	0.702
KZX10001.1	yrrB	MBFIL_19350	MBFIL_08110	Tetratricopeptide repeat protein.	TPR repeat-containing protein YrrB.	0.509
cmoA	KZX10001.1	MBFIL_03310	MBFIL_19350	tRNA (cmo5U34)-methyltransferase.	Tetratricopeptide repeat protein.	0.702
cmoA	cshA	MBFIL_03310	MBFIL_06780	tRNA (cmo5U34)-methyltransferase.	DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family.	0.652
cmoA	flpA	MBFIL_03310	MBFIL_11740	tRNA (cmo5U34)-methyltransferase.	Fibrillarin; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family.	0.652
cmoA	rpl7ae	MBFIL_03310	MBFIL_16810	tRNA (cmo5U34)-methyltransferase.	Putative ribosomal protein L7Ae-like protein; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	0.663
cmoA	rps19e	MBFIL_03310	MBFIL_05530	tRNA (cmo5U34)-methyltransferase.	30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.689
cmoA	rps3ae	MBFIL_03310	MBFIL_08050	tRNA (cmo5U34)-methyltransferase.	30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.	0.679
cmoA	rps6e	MBFIL_03310	MBFIL_16760	tRNA (cmo5U34)-methyltransferase.	30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.680
cmoA	rpsE	MBFIL_03310	MBFIL_16530	tRNA (cmo5U34)-methyltransferase.	30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy.	0.892
cmoA	rpsO	MBFIL_03310	MBFIL_02980	tRNA (cmo5U34)-methyltransferase.	30S ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.	0.675
cmoA	yrrB	MBFIL_03310	MBFIL_08110	tRNA (cmo5U34)-methyltransferase.	TPR repeat-containing protein YrrB.	0.693
cshA	cmoA	MBFIL_06780	MBFIL_03310	DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family.	tRNA (cmo5U34)-methyltransferase.	0.652
cshA	rpl7ae	MBFIL_06780	MBFIL_16810	DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family.	Putative ribosomal protein L7Ae-like protein; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	0.793
cshA	rps19e	MBFIL_06780	MBFIL_05530	DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family.	30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.551
cshA	rps3ae	MBFIL_06780	MBFIL_08050	DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family.	30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.	0.635
cshA	rps6e	MBFIL_06780	MBFIL_16760	DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family.	30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.867
cshA	rpsE	MBFIL_06780	MBFIL_16530	DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family.	30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy.	0.859
cshA	rpsO	MBFIL_06780	MBFIL_02980	DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family.	30S ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.	0.703
flpA	cmoA	MBFIL_11740	MBFIL_03310	Fibrillarin; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family.	tRNA (cmo5U34)-methyltransferase.	0.652