STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KZX17098.1Hydrogenase subunit F. (227 aa)    
Predicted Functional Partners:
KZX17100.1
Hypothetical protein.
  
    0.971
KZX17101.1
Hypothetical protein.
  
    0.937
KZX17105.1
Hypothetical protein.
  
  
 0.934
KZX17102.1
Hypothetical protein.
  
    0.925
KZX17099.1
Hypothetical protein.
  
    0.918
nuoH
NADH-quinone oxidoreductase subunit H.
  
  
 0.880
hycG_1
Formate hydrogenlyase subunit 7.
  
  
 0.862
KZX17103.1
Hypothetical protein.
  
    0.854
KZX17104.1
Hypothetical protein.
  
    0.820
ndhA
NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic.
  
  
 0.785
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.