STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KZX16981.1DNA-binding transcriptional regulator ModE. (233 aa)    
Predicted Functional Partners:
KZX10341.1
Putative binding protein precursor.
    
 0.979
moaA_1
Cyclic pyranopterin monophosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.
 
  
 0.915
fdhD
Protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
   
 0.903
cysW
Sulfate transport system permease protein CysW.
  
 
 0.877
potA
Spermidine/putrescine import ATP-binding protein PotA.
    
  0.869
moaC2
Cyclic pyranopterin monophosphate synthase accessory protein 2.
  
  
 0.853
moeZ
Putative adenylyltransferase/sulfurtransferase MoeZ.
     
 0.848
moeB
Molybdopterin-synthase adenylyltransferase.
     
 0.848
mobA_2
Molybdenum cofactor guanylyltransferase.
 
  
 0.831
moeA_2
Molybdopterin molybdenumtransferase.
 
  
 0.826
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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