STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KZX15841.1Coenzyme F420-reducing hydrogenase subunit beta. (357 aa)    
Predicted Functional Partners:
hydA
Periplasmic [Fe] hydrogenase large subunit.
 
 0.979
mer
Phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase; Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT; Belongs to the mer family.
 
 
 0.977
hoxH_2
NAD-reducing hydrogenase HoxS subunit beta; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.976
mtd
F420-dependent methylenetetrahydromethanopterin dehydrogenase; Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT.
  
 
 0.962
gltA_2
Glutamate synthase [NADPH] large chain.
  
    0.957
KZX11480.1
Coenzyme F420-reducing hydrogenase subunit beta.
  
  
0.947
hyaD
Hydrogenase 1 maturation protease.
  
 
 0.945
fdhF
Formate dehydrogenase H.
  
 0.819
purF_1
Amidophosphoribosyltransferase precursor.
 
    0.816
KZX17211.1
Methyl-viologen-reducing hydrogenase, delta subunit.
   
 0.775
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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