STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KZX15820.1Hypothetical protein. (391 aa)    
Predicted Functional Partners:
slyD
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD.
       0.937
selA
L-seryl-tRNA(Sec) selenium transferase.
  
     0.594
KZX10623.1
Oligosaccharyl transferase STT3 subunit.
  
     0.589
KZX10640.1
DNA-binding transcriptional regulator IlvY.
  
     0.575
KZX12576.1
Transcriptional regulator PhoU.
  
     0.574
cobQ_3
Cobyric acid synthase.
  
     0.566
KZX17436.1
Ferredoxin-2.
  
     0.537
prmA_2
Ribosomal protein L11 methyltransferase.
  
     0.510
KZX11175.1
Replication factor A.
  
     0.499
fbiB_3
Coenzyme F420:L-glutamate ligase.
  
     0.477
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.