Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KZX15740.1Hypothetical protein. (115 aa)    
Predicted Functional Partners:
KZX15741.1
Undecaprenyl-phosphate mannosyltransferase.
 
   
 0.926
KZX17592.1
Undecaprenyl-phosphate mannosyltransferase.
 
   
 0.647
lrpC
HTH-type transcriptional regulator LrpC.
       0.645
tyrS
tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 3 subfamily.
       0.611
ribH_1
6,7-dimethyl-8-ribityllumazine synthase.
       0.600
KZX10623.1
Oligosaccharyl transferase STT3 subunit.
 
     0.541
selA
L-seryl-tRNA(Sec) selenium transferase.
  
     0.486
KZX10640.1
DNA-binding transcriptional regulator IlvY.
  
     0.466
wzxC
Lipopolysaccharide biosynthesis protein WzxC.
 
   
 0.465
fbiB_3
Coenzyme F420:L-glutamate ligase.
  
     0.451
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.