STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pglJN-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase. (794 aa)    
Predicted Functional Partners:
KZX15587.1
Hypothetical protein.
       0.727
tagF_3
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
  
 0.651
wcaJ
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
 
 0.548
epsH_2
Putative glycosyltransferase EpsH.
 
 0.535
tagB
Putative CDP-glycerol:glycerophosphate glycerophosphotransferase.
 
  
 0.535
epsH_4
Putative glycosyltransferase EpsH.
 
 0.534
hddC
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
  
 0.492
KZX17106.1
UDP-glucose 4-epimerase.
 
 
 0.486
epsH_5
Putative glycosyltransferase EpsH.
 
 0.480
epsH_3
Putative glycosyltransferase EpsH.
 
 0.479
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.