Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KZX15166.1Tartronate semialdehyde reductase. (276 aa)    
Predicted Functional Partners:
prpD
2-methylcitrate dehydratase.
 
 
  0.750
KZX15165.1
Sulfur carrier protein ThiS.
       0.733
gapN
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.724
mmgD
2-methylcitrate synthase.
 
 
 0.706
acsA_1
Acetyl-coenzyme A synthetase.
  
 
 0.577
ydaF
Putative ribosomal N-acetyltransferase YdaF.
 
  
  0.549
accC
Biotin carboxylase.
    
 0.548
porB
Pyruvate synthase subunit PorB.
    
  0.541
porA
Pyruvate synthase subunit PorA.
    
  0.539
cfiA
2-oxoglutarate carboxylase large subunit.
     
  0.533
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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