Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
epsH_3Putative glycosyltransferase EpsH. (579 aa)    
Predicted Functional Partners:
KZX14727.1
Hypothetical protein.
       0.603
tagF_1
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
  
 0.581
tagF_3
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
  
 0.567
tagF_2
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
 
0.481
pglJ
N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase.
 
 0.479
galE
UDP-glucose 4-epimerase.
 
 
 0.468
KZX17106.1
UDP-glucose 4-epimerase.
 
 
 0.448
tagB
Putative CDP-glycerol:glycerophosphate glycerophosphotransferase.
  
 0.442
rmd
GDP-6-deoxy-D-mannose reductase.
 
 
 0.432
tagF_4
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
 
0.432
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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