Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KZX14467.1Sugar-specific transcriptional regulator TrmB. (268 aa)    
Predicted Functional Partners:
ilvB_3
Acetolactate synthase isozyme 1 large subunit.
   
    0.654
KZX12219.1
Hypothetical protein; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain.
   
    0.654
yitD
Phosphosulfolactate synthase.
   
    0.578
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
       0.525
KZX14468.1
Nucleotidyltransferase domain protein.
       0.480
KZX14469.1
HEPN domain protein.
       0.472
KZX13494.1
Hypothetical protein; Involved in DNA damage repair.
  
     0.450
KZX16206.1
Cell division control protein 6; Involved in regulation of DNA replication.
  
     0.445
moaA_2
Cyclic pyranopterin monophosphate synthase.
     
 0.402
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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