Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KZX14473.1Hypothetical protein. (129 aa)    
Predicted Functional Partners:
KZX10072.1
Flagellar assembly protein J.
 
     0.687
padE_1
NADH-dependent phenylglyoxylate dehydrogenase subunit gamma.
       0.671
korA_1
2-oxoglutarate oxidoreductase subunit KorA.
       0.671
ndhI_2
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic.
       0.663
korA_2
2-oxoglutarate oxidoreductase subunit KorA.
       0.663
KZX10071.1
Putative conjugal transfer proteinc.
 
     0.571
purL_1
Phosphoribosylformylglycinamidine synthase 2; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]
       0.453
korB_1
2-oxoglutarate oxidoreductase subunit KorB.
       0.429
KZX10729.1
Translation initiation factor Sui1; Belongs to the SUI1 family.
       0.418
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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