STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KZX13989.1Ion channel. (193 aa)    
Predicted Functional Partners:
nhaP
K(+)/H(+) antiporter NhaP.
     
 0.770
KZX13988.1
Succinylglutamate desuccinylase / aspartoacylase family protein.
       0.565
obg
GTPase Obg.
     
  0.557
KZX11689.1
GMC oxidoreductase.
     
 0.532
dpnC
Type-2 restriction enzyme DpnI.
     
 0.526
dnaK
Chaperone protein DnaK; Acts as a chaperone.
     
 0.466
KZX09992.1
Hypothetical protein.
  
    0.425
KZX13990.1
Hypothetical protein.
       0.412
KZX13991.1
Hypothetical protein.
       0.412
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.