trmI protein (Methanobrevibacter filiformis)

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second shell of interactors

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Score

trmI

tRNA (adenine(58)-N(1))-methyltransferase TrmI. (243 aa)

Predicted Functional Partners:

tgt_1

0.860

pyrB

0.805

rlmE

0.764

dbpA_2

0.724

rps8e

0.693

rpmD

0.669

obgE

0.638

KZX12131.1

0.635

ttcA_1

0.600

ttcA_2

0.583

Your Current Organism:

Methanobrevibacter filiformis

NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KZX12131.1	obgE	MBFIL_12180	MBFIL_02040	H/ACA RNA-protein complex component Gar1.	GTPase ObgE/CgtA.	0.715
KZX12131.1	rlmE	MBFIL_12180	MBFIL_15700	H/ACA RNA-protein complex component Gar1.	Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	0.420
KZX12131.1	rpmD	MBFIL_12180	MBFIL_16540	H/ACA RNA-protein complex component Gar1.	50S ribosomal protein L30.	0.542
KZX12131.1	rps8e	MBFIL_12180	MBFIL_06850	H/ACA RNA-protein complex component Gar1.	30S ribosomal protein S8e.	0.679
KZX12131.1	trmI	MBFIL_12180	MBFIL_10940	H/ACA RNA-protein complex component Gar1.	tRNA (adenine(58)-N(1))-methyltransferase TrmI.	0.635
dbpA_2	trmI	MBFIL_10950	MBFIL_10940	ATP-dependent RNA helicase DbpA.	tRNA (adenine(58)-N(1))-methyltransferase TrmI.	0.724
obgE	KZX12131.1	MBFIL_02040	MBFIL_12180	GTPase ObgE/CgtA.	H/ACA RNA-protein complex component Gar1.	0.715
obgE	rlmE	MBFIL_02040	MBFIL_15700	GTPase ObgE/CgtA.	Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	0.937
obgE	rpmD	MBFIL_02040	MBFIL_16540	GTPase ObgE/CgtA.	50S ribosomal protein L30.	0.969
obgE	rps8e	MBFIL_02040	MBFIL_06850	GTPase ObgE/CgtA.	30S ribosomal protein S8e.	0.982
obgE	trmI	MBFIL_02040	MBFIL_10940	GTPase ObgE/CgtA.	tRNA (adenine(58)-N(1))-methyltransferase TrmI.	0.638
pyrB	trmI	MBFIL_10930	MBFIL_10940	Aspartate carbamoyltransferase.	tRNA (adenine(58)-N(1))-methyltransferase TrmI.	0.805
rlmE	KZX12131.1	MBFIL_15700	MBFIL_12180	Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	H/ACA RNA-protein complex component Gar1.	0.420
rlmE	obgE	MBFIL_15700	MBFIL_02040	Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	GTPase ObgE/CgtA.	0.937
rlmE	rpmD	MBFIL_15700	MBFIL_16540	Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	50S ribosomal protein L30.	0.919
rlmE	rps8e	MBFIL_15700	MBFIL_06850	Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	30S ribosomal protein S8e.	0.931
rlmE	trmI	MBFIL_15700	MBFIL_10940	Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	tRNA (adenine(58)-N(1))-methyltransferase TrmI.	0.764
rpmD	KZX12131.1	MBFIL_16540	MBFIL_12180	50S ribosomal protein L30.	H/ACA RNA-protein complex component Gar1.	0.542
rpmD	obgE	MBFIL_16540	MBFIL_02040	50S ribosomal protein L30.	GTPase ObgE/CgtA.	0.969
rpmD	rlmE	MBFIL_16540	MBFIL_15700	50S ribosomal protein L30.	Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	0.919