Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KZX12635.1Hypothetical protein. (264 aa)    
Predicted Functional Partners:
KZX10447.1
Hypothetical protein; Belongs to the UPF0179 family.
 
   
 0.768
KZX16987.1
Hypothetical protein.
     
 0.735
egsA
Glycerol-1-phosphate dehydrogenase; Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea.
     
 0.701
KZX17317.1
Hypothetical protein.
  
     0.655
KZX12634.1
PHP domain protein.
       0.641
KZX17316.1
Hypothetical protein.
  
     0.574
KZX17447.1
RNA polymerase Rpb4.
  
     0.494
era
GTPase Era.
  
     0.486
KZX10551.1
Hypothetical protein.
  
     0.481
KZX16206.1
Cell division control protein 6; Involved in regulation of DNA replication.
  
     0.479
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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